While looking for the ledgendary Mapman, the last surviving member of the Nomad Star tribe, Lipumira finds him in Tokyo. His name is Gen Tokishima and he is the only one able to get one part of the starmap hidden within the Earth. After retrieving the piece, Gen must make a decision to follow Lipumira in her foolhardy search to find the remaining pieces of the starmap or stay on Earth. He makes his decision, only to find his girlfriend has beaten him to the spaceship as she wants to come as well. Unfortunately, as Gen learns the secret of the starmap, Lipumira's sisters have plans to stop her and will stop her at any cost.

In the great Garubado Empire, a lethal weapon is in the process of being manufactured, but is stolen and subsequently lost in battle. Now the Empire is looking for this weapon: a girl that can call forth the "Dragoon" power. She has amnesia and is found by a wandering swordsman in training by who vows to help her find out who she is and why she has such a strange power.

When the spring that supplies water to her kingdom dries up, the Princess decides to go into the desert in search of a faraway oasis that is said to exist. The Princess and her animal friends face many challenges in their journey to save the draught-stricken kingdom.

Pokémon are marvelous creatures that come in a variety of types and sizes, with abilities, powers, and personalities as diverse as they are numerous. Doctor Yukinari Ookido has dedicated his life to studying these fascinating beings, that can be caught, trained, traded, and battled against each other. There's only so much he can do from his lab though. With this in mind, Ookido entrusts two young boys with a Pokémon of their own and a computerized encyclopedia to catalog them. One of them, Green, is brash, passionate, slightly arrogant, and Doctor Ookido's own nephew. The other boy, Red, is equally passionate, and filled with a wide-eyed, mildly naive sense of wonder. Pokémon: The Origin follows Red in his journey through the region of Kanto in his attempt to complete his "Pokédex" by capturing and cataloging all the Pokémon that exist. Along the way he'll discover there's more to himself and his goals than he originally thought. Red will have to put both himself and his Pokémon to the test in special Gyms whose leaders are steps along the way to the Pokémon League, in order to challenge the Elite Four and become a Pokémon League Champion. Aside from his goals to become a Champion, Red has other problems brewing. There are others who capture and train Pokémon for more sinister reasons, with the infamous criminal organization Team Rocket being one of them. If Red can defeat them, fellow trainers, his rival Green, and wild Pokémon all through Kanto, he just may fulfill his own dream, and Doctor Ookido's as well.