January 2118. Chief Inspector of the Criminal Investigation Department, Akane Tsunemori, receives a report of an incident on a foreign vessel – the body of Professor Milicia Stronskaya has been discovered. Behind the incident is a group known as the Peacebreakers, a foreign paramilitary organization and a new outside threat who are targeting the professor's research papers known as the "Stronskaya Document". Reunited with Shinya Kogami, a former fugitive from the Criminal Investigation Department, Akane grapples with a case that quickly escalates beyond their expectations. The Stronskaya Papers could reveal a truth that would shake Japan's government, and even the Sibyl System, to the core. It is in this untold story that the missing link is revealed.

In a Kaiju-filled Japan, Kafka Hibino works in monster disposal. After reuniting with his childhood friend Mina Ashiro, a rising star in the anti-Kaiju Defense Force, he decides to pursue his abandoned dream of joining the Force... when he suddenly transforms into the powerful "Kaiju No. 8." With help from his junior colleague Reno Ichikawa, Kafka hides his identity while striving towards his life-long dream of passing the Defense Force exam and standing at Mina's side. But when mysterious intelligent Kaiju attack a Defense Force base, Kafka faces a crucial decision in a desperate situation...

The Fifth Holy Grail War in Fuyuki City has reached a turning point in which the lives of all participants are threatened as the hidden enemy finally reveals itself. As Shirou Emiya, Rin Toosaka, and Illyasviel von Einzbern discover the true, corruptive nature of the shadow that has been rampaging throughout the city, they realize just how dire the situation is. In order to protect their beloved ones, the group must hold their own against the seemingly insurmountable enemy force—even if some of those foes were once their allies, or perhaps, something more intimate.

As the final act of this chaotic war commences, the ideals Shirou believes will soon be challenged by an excruciating dilemma: is it really possible to save a world where everything seems to have gone wrong?

[Written by MAL Rewrite]